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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BLCA rs62346179 chr4:170621045 T/G 4.01E-8 205 9.05 11.08 0.57 KM Plot
BLCA rs625427 chr11:65003812 T/C 0 214 2.73 12.37 8.87 KM Plot
BLCA rs630055 chr11:65087533 G/T 0.000152 216 5.13 13 8.58 KM Plot
BLCA rs636928 chr11:65093484 A/C 0 213 8.87 13 2.73 KM Plot
BLCA rs640919 chr15:40779963 T/C 3.18E-5 215 10.9 6.8 5.43 KM Plot
BLCA rs6438423 chr3:117560873 T/C 0.000131 215 6.57 2.48 10.13 KM Plot
BLCA rs6438426 chr3:117577223 T/C 0.000131 215 6.57 2.48 10.13 KM Plot
BLCA rs6446477 chr4:6245217 A/G 2.92E-5 216 5.13 14.07 9.07 KM Plot
BLCA rs6484862 chr11:36560795 A/G 2.04E-11 216 3.6 13.57 9.03 KM Plot
BLCA rs650056 chr11:65025106 G/A 3.87E-14 214 2.17 12.33 9.05 KM Plot
BLCA rs655433 chr11:65069275 G/C 1.15E-13 211 8.7 13 2.17 KM Plot
BLCA rs6600222 chr16:536631 C/T 2.13E-8 216 9.8 7.43 2.12 KM Plot
BLCA rs66482644 chr18:5245861 G/C 1.48E-7 216 9.07 12.43 4.73 KM Plot
BLCA rs66486871 chr18:5266321 T/G 7.98E-10 214 9.05 12.82 4.85 KM Plot
BLCA rs667341 chr11:65050182 T/C 0 216 9.03 12.4 2.73 KM Plot